Fix plot_phasespacedata and plot_profiledata
Change color map for streak plots for plot_profiledata, plot_wakedata, plot_cavitydata

Allow to plot detuning, tuning angle and powers from tracking.

Fix error on plot_beamdata.
Add option to specify ylim to streak_bunchspectrum and to streak_beamspectrum.

Convert h5py data into numpy arrays as fancy indexing is broken in h5py >= 3.1.0

Fix BeamSpectrumMonitor
Add plotting functions for BeamSpectrumMonitor

Add plot_bunchspectrum and streak_bunchspectrum
Fix bug (double plot) in plot_bunchdata
Remove plot_tunedata

Rework plot_beamdata and plot_bunchdata to be able to plot multiple hdf5 files at the same time
New function streak_beamdata to separate the streak plot option.

Add options to plot beamdata vs index and in streak plot mode
Add setting of colorscale for plot_cavitydata

Fix bug when buffer_size=1 in TuneMonitor by switching to init buffer_count to 0. Now total_size should be 1 less.
Improve plot_tunedata

Fix plot_profiledata error due to change to center instead of bins
Fix plot_cavitydata legends and turn selection

Add a dict_dtype optional parameter to Monitor.monitor_init to allow to choose the dtype to use to save the data.
Improve CavityMonitor to allow for saving beam and cavity phasor for all bunches
Add a plot_cavitydata function
Fix a bug on CavityResonator.track -> nturn += 1 at correct time
Change CavityResonator.track to allow for monitoring the cavity/beam phasor at each bunch

Change back invariant name to cs_invariant
Simplify SkewQuadrupole track method

Remove for-loops inside the function.

- cs_invariant method in Bunch is renamed to 'action'.
- Action is now saved together with BunchMonitor and can be plotted in plot_bunchdata

Main change
- Variable local_beta, local_alpha, and local_gamma are made property objects.

Minor change
- Add an option to plot phase space in different style.

Change track method to allow for Beam objects
If pynaff can not find the tune, the tune value is nan.
Nanmean and nanstd are used to avoid to bias the tune value.
! Untested if some particles are lost !

WakePotentialMonitor now use interpolation on a fixed grid to be able to save the wake potential data (which size change from turn to turn).

Correct scale in plot_wakedata
Avoid circular import by moving import in function

- Option to plot bunch current on x-axis has been included in plot_bunchdata.
- Option to select the plot size for plot_phasespacedata has been added.

- Shift of x-axis when start is changed has been fixed.
- Added option to plot other dimensions apart from 'tau'.
- Improved code conciseness and efficiency.

A new function for plotting profile monitor has been added. Two types of plot can be obtained : bunch profile evolution and streak plot.

Plotting routines now return figure object.

Two new plotting routines have been added
- plot_optics for plotting optical variables (beta, alpha, gamma, despersion)
- plot_beamdata for plotting data recorded by BeamMonitor

Rebase test_plot on master
plot_phasespacedata -> only "particles" dataset is plotted
plot_phasespacedata -> mandatory arguments

- total_size and save_every input parameters have been removed.
- only_alive option function has been changed
- Some small corrections on scaling of delta, bunch_charge, bunch_current

- "plot_bunchdata" and "plot_phasespacedata" have been separated from particles module.
- Input prompt has been removed from the code.
- Plotting method for variables in Beam object such as "bunch_current" and "bunch_charge" with respect to bunch number has been added.
- Only alive particles plotting option has been added.

- total_size and save_every input parameters have been removed.
- only_alive option function has been changed
- Some small corrections on scaling of delta, bunch_charge, bunch_current

- "plot_bunchdata" and "plot_phasespacedata" have been separated from particles module.
- Input prompt has been removed from the code.
- Plotting method for variables in Beam object such as "bunch_current" and "bunch_charge" with respect to bunch number has been added.
- Only alive particles plotting option has been added.