Commits · master · DISCO Beamline / Bacteria Drug UV analysis · GitLab

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Jul 30, 2024
- first import of a bacteria tracking version to follow moving bacteria · a57d791d
  Hugo chauvet authored 11 months ago
  
  a57d791d
- first import of a bacteria tracking version to follow moving bacteria · 72bd425b
  Hugo chauvet authored 11 months ago
  
  72bd425b
Jul 24, 2023
- Add the option to choose on which filter you can stabilize the image (so that... · a0f4b275
  Hugo CHAUVET authored 1 year ago
  a0f4b275
Jul 19, 2023
- Add many option to process data, with sift algorith to register stack, single... · 420b7842
  Hugo CHAUVET authored 2 years ago
  420b7842
Sep 12, 2022
- Fix type error in default arguments of function · 0968ed21
  Hugo CHAUVET authored 2 years ago
  
  0968ed21
Jul 01, 2022
- improve perf of the viewver and correct bug in xls export · 6e095af1
  Hugo chauvet authored 3 years ago
  
  6e095af1
Jun 13, 2022
- Translate notebooks' · ca410fb8
  Hugo chauvet authored 3 years ago
  
  ca410fb8
- translation of comments · 010fd374
  Hugo chauvet authored 3 years ago
  
  010fd374
Jun 11, 2022
- Translate bactos_functions.py comments to english · e3c3d0ae
  Hugo chauvet authored 3 years ago
  
  e3c3d0ae
Jun 08, 2022
- Add encoding 'latin1' to open metadata of MM · 62b6ec22
  Hugo CHAUVET authored 3 years ago
  
  62b6ec22
Oct 27, 2021
- Add abspath for stardist finding · a814de8a
  hchauvet authored 3 years ago
  
  a814de8a
- Add stardist location in extracting notebook example · 1aa69adc
  hchauvet authored 3 years ago
  
  1aa69adc
- Fix bug for MM1.4 date in run_processing · 424c8aec
  hchauvet authored 3 years ago
  
  424c8aec
Oct 26, 2021
- add new option in extraction notebook · 4b3b7121
  hugo chauvet authored 3 years ago
  
  4b3b7121
- Add chromatism aberation correction, get ready for ACAMAS · ab9387d2
  hugo chauvet authored 3 years ago
  
  ab9387d2
Sep 29, 2021
- fix bug for MM1 in run_processing · 5f354425
  Hugo CHAUVET authored 3 years ago
  
  5f354425
- fix default path to stardist · 8e139ebb
  Hugo CHAUVET authored 3 years ago
  
  8e139ebb
Sep 28, 2021
- add local bg estimation and improve bactos viewver · 1417266f
  hugo chauvet authored 3 years ago
  
  1417266f
Apr 19, 2021
- re-import stardist trained model · c416af80
  hugo chauvet authored 4 years ago
  
  c416af80
- Improve registration, remove spurious pixel lines of PIXIS and cosmics · b71ec7bd
  hugo chauvet authored 4 years ago
  
  b71ec7bd
Dec 09, 2020
- improve visualisation of data for fixed time experiments · a2a1fcd0
  hugo chauvet authored 4 years ago
  
  a2a1fcd0
Dec 08, 2020
- max name length in excel sheet export is 31 · 913c1e00
  hugo chauvet authored 4 years ago
  
  913c1e00
- revert #fa1cf339 , the bug was that position... · 7702c0e0
  hugo chauvet authored 4 years ago
  7702c0e0
- Fix extra positions bug in compute_control_ratio. The positions vector add an extra position · fa1cf339
  hugo chauvet authored 4 years ago
  
  fa1cf339
Dec 07, 2020
- fix bug, only two positions where used to register between filter1 and filter0... · 5884e2cd
  hugo chauvet authored 4 years ago
  5884e2cd
Dec 02, 2020
- Get pixel size from summary in metadata, and check that pixel size is not None · 5dbf7bbc
  hugo chauvet authored 4 years ago
  
  5dbf7bbc
Nov 30, 2020
- update README to add a link to extraction notebook · ef4f62ad
  hugo chauvet authored 4 years ago
  
  ef4f62ad
- Delete events.out.tfevents.1593847538.ORD00126.synchrotron-soleil.fr · 728a0ddf
  hugo chauvet authored 4 years ago
  
  728a0ddf
- remove model.zip and an old extract-notebook · 31bc0467
  hugo chauvet authored 4 years ago
  
  31bc0467
- Merge remote-tracking branch 'gitlab/master' · bfc50f0c
  hugo chauvet authored 4 years ago
  
  bfc50f0c
- Update README.md · f7439267
  Matthieu Refregiers authored 4 years ago
  
  f7439267
- Add todo to readme · bb1e67f7
  hugo chauvet authored 4 years ago
  
  bb1e67f7
- Add stardist trained model for Bacteria on DUV images · d054ad78
  hugo chauvet authored 4 years ago
  
  d054ad78
- Add trainning notebook and procedure, Improve notebook for processing, add a... · 3bc0baf9
  hugo chauvet authored 4 years ago
  3bc0baf9
- Add reference to stardist · c0b0e130
  hugo chauvet authored 4 years ago
  
  c0b0e130
- Add LICENSE · f3ee5a1a
  hugo chauvet authored 4 years ago
  
  f3ee5a1a
- Update README.md · 6305e860
  hugo chauvet authored 4 years ago
  
  6305e860
- Correct title in readme.md · 3496cc74
  hugo chauvet authored 4 years ago
  
  3496cc74
- Create a readme · 2c8beb48
  hugo chauvet authored 4 years ago
  
  2c8beb48
Sep 15, 2020
- Fix bug in violinplot for the current expe' · fc726fbf
  hugo chauvet authored 4 years ago
  
  fc726fbf

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