Dockerfile

FROM gitlab-registry.synchrotron-soleil.fr/software-control-system/containers/dev-docker-tools/dev-el7-gcc48

LABEL maintainer="Patrick Madela <patrick.madela@synchrotron-soleil.fr"

RUN rm -rf /etc/localtime && ln -s /usr/share/zoneinfo/Europe/Paris /etc/localtime \
    # Fix Centos repo urls
    && sed -i 's/mirrorlist/#mirrorlist/g' /etc/yum.repos.d/CentOS-* \
    && sed -i 's|#\s*baseurl=http://mirror.centos.org|baseurl=http://vault.centos.org|g' /etc/yum.repos.d/CentOS-* \
    && yum update -y \
    && yum install -y curl bzip2 \
    && yum clean all \
    # Add groups
    && groupadd g1001 -g 1001 \
    && groupadd g1000 -g 1000 \
    && groupadd g2000 -g 2000 \
    # Creation of conan user
    && useradd -ms /bin/bash conan -u 1000 -g 1001 -G 1000,2000,999 \
    # Add sudo for conan user
    && printf "conan:conan" | chpasswd \
    && printf "conan ALL= NOPASSWD: ALL\\n" >> /etc/sudoers

ENV MAMBA_ROOT_PREFIX=/opt/micromamba
ENV PATH=${MAMBA_ROOT_PREFIX}/bin-wrappers:$PATH
ENV MAMBA_ENV=conan-el7-gcc114

# Configure micromamba environment
COPY ${MAMBA_ENV}/environment.yml /tmp/environment.yml

# Install micromamba
RUN curl -Ls https://micro.mamba.pm/api/micromamba/linux-64/latest | tar -xvj -C /usr/local/bin --strip-components=1 bin/micromamba \
    # Install environment with micromamba
    && micromamba create -y -f /tmp/environment.yml \
    && rm /tmp/environment.yml \
    # Install wrapper to launch commands using micromamba for Jenkins (docker exec)
    && mkdir -p /opt/micromamba/bin-wrappers \
    && echo '#!/bin/bash' > /opt/micromamba/bin-wrappers/micromamba-wrapper.sh \
    && echo 'exec /usr/local/bin/micromamba run -n ${MAMBA_ENV} $(basename $0) "$@"' >> /opt/micromamba/bin-wrappers/micromamba-wrapper.sh \
    && chmod +x /opt/micromamba/bin-wrappers/micromamba-wrapper.sh \
    # Link all binaries to wrapper
    && for bin in $(ls /opt/micromamba/envs/${MAMBA_ENV}/bin); do \
    ln -s micromamba-wrapper.sh /opt/micromamba/bin-wrappers/$bin; \
    done

COPY environment /etc/environment 
USER conan
WORKDIR /home/conan

# Activate environment when launching command 
ENTRYPOINT ["bash", "-c" ,"eval \"$(micromamba shell hook --shell bash)\" && micromamba activate ${MAMBA_ENV} && \"$@\"", "-s"]

# Define default shell and activate environment
SHELL ["/bin/bash", "-c"]
RUN echo 'eval "$(micromamba shell hook --shell=bash)"' >> ~/.bashrc \
    && echo 'micromamba activate ${MAMBA_ENV}' >> ~/.bashrc

# Lauch interactive shell by default
CMD ["/bin/bash"]