fix bug with multiz

ImageJ/utils/IJmmlib.py

@@ -24,7 +24,6 @@ def load_mm_images(rootdir, roi=1, tile=True, pos=False,
     if mmversion == 1:
         stack_order = ['position', 'z', 'time', 'channels']
     else:
-        # Read the stack order from metadata (before it was set to ['position', 'time', 'channels', 'z'])
         stack_order = get_axisorder(metadata)
         IJ.log('MM axis order')
         IJ.log(','.join(stack_order))
@@ -32,6 +31,8 @@ def load_mm_images(rootdir, roi=1, tile=True, pos=False,
         stack_order = stack_order[::-1]
         stack_order[stack_order.index('channel')] = 'channels'
         
+        # stack_order = ['position', 'time', 'channels', 'z']
+
     # if not tile and pos:
         # stack_order = ['position', 'time', 'z', 'channels']
     image_files = generate_file_list(metadata, rootdir, roi, tile, pos, stack_order)
@@ -52,7 +53,7 @@ def load_mm_images(rootdir, roi=1, tile=True, pos=False,
     # dim starts at one in java not zero
     # Size of channels
     nchannel = dimensions['channels']
-    # Size of z 
+    # Size of z 
     nslice = dimensions['z']
     
     # The rest of dimensions goes to time